Assessment of the disease severity in patients hospitalized for COVID-19 based on the National Early Warning Score (NEWS) using statistical and machine learning methods: An electronic health records database analysis

Author:

Lycholip Valentinas12,Puronaitė Roma134,Skorniakov Viktor2,Navickas Petras145,Tarutytė Gabrielė16,Trinkūnas Justas17,Burneikaitė Greta14,Kazėnaitė Edita14,Jankauskienė Augustina14

Affiliation:

1. Vilnius University Hospital Santaros Klinikos, Vilnius, Lithuania

2. Institute of Applied Mathematics, Faculty of Mathematics and Informatics, Vilnius University, Vilnius, Lithuania

3. Institute of Data Science and Digital Technologies, Faculty of Mathematics and Informatics, Vilnius University, Vilnius, Lithuania

4. Institute of Clinical Medicine, Faculty of Medicine, Vilnius University, Vilnius, Lithuania

5. State Research Institute Centre for Innovative Medicine, Vilnius, Lithuania

6. Department of Research and Innovation, Faculty of Medicine, Vilnius University, Vilnius, Lithuania

7. Faculty of Fundamental Sciences, Vilnius Gediminas Technical University, Vilnius, Lithuania

Abstract

BACKGROUND: The coronavirus disease 2019 (COVID-19) was a cause of concern in the healthcare system and increased the need for disease severity indicators. However, they still vary in use to evaluate in-hospital outcomes and severity. The National Early Warning Score (NEWS) is routinely used to evaluate patient health status at the hospital. Further research is needed to ensure if NEWS can be a good instrument for an overall health status assessment with or without additional information like laboratory tests, intensive care needs, and history of chronic diseases. OBJECTIVE: To evaluate if NEWS can be an indicator to measure COVID-19 patient status in-hospital. METHODS: We used the fully anonymized Electronic Health Records (EHR) characterizing patients admitted to the hospital with COVID-19. Data was obtained from Vilnius University Hospital Santaros Klinikos EHR system (SANTA-HIS) from 01-03-2020 to 31-12-2022. The study sample included 3875 patients. We created several statistical and machine learning models for discrimination between in-hospital death/discharge for evaluation NEWS as a disease severity measure for COVID-19 patients. In these models, two variable sets were considered: median NEWS and its combination with clinical parameters and medians of laboratory test results. Assessment of models’ performance was based on the scoring metrics: accuracy, sensitivity, specificity, area under the ROC curve (AUC), and F1-score. RESULTS: Our analysis revealed that NEWS predictive ability for describing patient health status during the stay in the hospital can be increased by adding the patient’s age at hospitalization, gender, clinical and laboratory variables (0.853 sensitivity, 0.992 specificity and F1-score – 0.859) in comparison with single NEWS (0.603, 0.995, 0.719, respectively). A comparison of different models showed that stepwise logistic regression was the best method for in-hospital mortality classification. Our findings suggest employing models like ours for advisory routine usage. CONCLUSION: Our model demonstrated incremental value for COVID-19 patient’s status evaluation.

Publisher

IOS Press

Subject

Health Informatics,Biomedical Engineering,Information Systems,Biomaterials,Bioengineering,Biophysics

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