Identification of COVID-19 samples from chest X-Ray images using deep learning: A comparison of transfer learning approaches

Author:

Rahaman Md Mamunur1,Li Chen1,Yao Yudong2,Kulwa Frank1,Rahman Mohammad Asadur3,Wang Qian4,Qi Shouliang1,Kong Fanjie5,Zhu Xuemin6,Zhao Xin7

Affiliation:

1. Microscopic Image and Medical Image Analysis Group, College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, China

2. Department of Electrical and Computer Engineering, Stevens Institute of Technology, Hoboken, NJ, USA

3. Faculty of Biochemistry and Molecular Medicine, University of Oulu, Oulu, Finland

4. Liaoning Hospital and Institute, Cancer Hospital of China Medical University, Shenyang, China

5. Electrical Engineering Department, Pratt School of Engineering Duke University, Durham, NC, USA

6. Whiting School of Engineering, Johns Hopkins University, 500 W University Parkway, MD, USA, USA

7. Environmental Engineering Department, Northeastern University, Shenyang, China

Abstract

BACKGROUND: The novel coronavirus disease 2019 (COVID-19) constitutes a public health emergency globally. The number of infected people and deaths are proliferating every day, which is putting tremendous pressure on our social and healthcare system. Rapid detection of COVID-19 cases is a significant step to fight against this virus as well as release pressure off the healthcare system. OBJECTIVE: One of the critical factors behind the rapid spread of COVID-19 pandemic is a lengthy clinical testing time. The imaging tool, such as Chest X-ray (CXR), can speed up the identification process. Therefore, our objective is to develop an automated CAD system for the detection of COVID-19 samples from healthy and pneumonia cases using CXR images. METHODS: Due to the scarcity of the COVID-19 benchmark dataset, we have employed deep transfer learning techniques, where we examined 15 different pre-trained CNN models to find the most suitable one for this task. RESULTS: A total of 860 images (260 COVID-19 cases, 300 healthy and 300 pneumonia cases) have been employed to investigate the performance of the proposed algorithm, where 70% images of each class are accepted for training, 15% is used for validation, and rest is for testing. It is observed that the VGG19 obtains the highest classification accuracy of 89.3% with an average precision, recall, and F1 score of 0.90, 0.89, 0.90, respectively. CONCLUSION: This study demonstrates the effectiveness of deep transfer learning techniques for the identification of COVID-19 cases using CXR images.

Publisher

IOS Press

Subject

Electrical and Electronic Engineering,Condensed Matter Physics,Radiology Nuclear Medicine and imaging,Instrumentation,Radiation

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