Prediction of Contact Residues in Anti-HIV Neutralizing Antibody by Deep Learning
Author:
Affiliation:
1. Clinical Retrovirology, Joint Research Center for Human Retrovirus Infection, Kumamoto University
2. Department of Pathology, New York University School of Medicine
Publisher
Editorial Committee of Japanese Journal of Infectious Diseases, National Institute of Infectious Dis
Subject
Infectious Diseases,Microbiology (medical),General Medicine
Link
https://www.jstage.jst.go.jp/article/yoken/73/3/73_JJID.2019.496/_pdf
Reference37 articles.
1. 1. Balasubramanian P, Kumar R, Williams C, et al. Differential induction of anti-V3 crown antibodies with cradle- and ladle binding modes in response to HIV-1 envelope vaccination. Vaccine. 2017; 35: 1464-73.
2. 2. Hessell AJ, McBurney S, Pandey S, et al. Induction of neutralizing antibodies in rhesus macaques using V3 mimotope peptides. Vaccine. 2016; 34: 2713-21.
3. 3. Matsushita S, Yoshimura K, Ramirez KP, et al. Passive transfer of neutralizing mAb KD-247 reduces plasma viral load in patients chronically infected with HIV-1. AIDS. 2015; 29: 453-62.
4. 4. Gorny MK, Sampson J, Li H, et al. Human anti-V3 HIV 1 monoclonal antibodies encoded by the VH5-51/VL lambda genes define a conserved antigenic structure. PLoS One. 2011; 6: e27780.
5. 5. Chan KW, Pan R, Costa M, et al. Structural comparison of human anti-HIV-1 gp120 V3 monoclonal antibodies of the same gene usage induced by vaccination and chronic infection. J Virol. 2018; 92. pii: e00641-18.
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