SERPINA1 Gene Variants in Individuals from the General Population with Reduced α1-Antitrypsin Concentrations

Author:

Zorzetto Michele1,Russi Erich2,Senn Oliver23,Imboden Medea34,Ferrarotti Ilaria1,Tinelli Carmine1,Campo Ilaria1,Ottaviani Stefania1,Scabini Roberta1,von Eckardstein Arnold4,Berger Wolfgang5,Brändli Otto6,Rochat Thierry7,Luisetti Maurizio1,Probst-Hensch Nicole3,

Affiliation:

1. Center for Diagnosis of Severe Alpha1-antitrypsin Deficiency, Laboratory of Biochemistry and Genetics, Institute for Respiratory Disease and Unit of Statistics and Biometry, Fondazione IRCCS Policlinico San Matteo, University of Pavia, Italy

2. Pulmonary Division, University Hospital of Zurich, Switzerland

3. Molecular Epidemiology/Cancer Registry, Institutes of Social and Preventive Medicine and Clinical Pathology, University of Zurich, Switzerland

4. Institute of Clinical Chemistry, University Hospital of Zürich, Switzerland

5. Division of Medical Molecular Genetics and Gene Diagnostics, Institute of Medical Genetics, University of Zurich, Switzerland

6. Zürcher Höhenklinik Wald, Switzerland

7. Division of Pulmonary Medicine, University Hospitals of Geneva, Geneva, Switzerland

Abstract

Abstract Background: Individuals with severe deficiency in serum α1-antitrypsin (AAT) concentrations are at high risk for developing chronic obstructive pulmonary disease (COPD), whereas those carrying the PI*MZ genotype are at slightly increased risk. Testing appropriate subgroups of the population for AAT deficiency (AATD) is therefore an important aspect of COPD prevention and timely treatment. We decided to perform an exhaustive investigation of SERPINA1 gene variants in individuals from the general population with a moderately reduced serum AAT concentration, because such information is currently unavailable. Methods: We determined the Z and S alleles of 1399 individuals enrolled in the Swiss Cohort Study on Air Pollution and Lung Diseases in Adults (SAPALDIA) with serum AAT concentrations ≤1.13 g/L and submitted 423 of these samples for complete exon 2→5 sequencing. Results: We found that 900 of 1399 samples (64%), carried the normal PI*MM genotype, whereas 499 samples (36%) carried at least 1 SERPINA1 deficiency variant. In the subpopulations in which AAT concentrations ranged from >1.03 to ≤1.13 and from >0.93 to ≤1.03 g/L, individuals with the PI*MM genotype represented the majority (86.5% and 53.8%, respectively). The PI*MS genotype was predominant (54.9%) in the AAT range of 0.83 to 0.93 g/L, whereas PI*MZ represented 76.4% in the AAT range of >0.73 to ≤0.83 g/L. Conclusions: This analysis provided a detailed molecular definition of intermediate AATD, which would be helpful in the diagnostic setting.

Funder

National Science Foundation

Publisher

Oxford University Press (OUP)

Subject

Biochemistry (medical),Clinical Biochemistry

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