Minimal residual disease (MRD) detection with circulating tumor DNA (ctDNA) from personalized assays in stage II-III colorectal cancer patients in a U.K. multicenter prospective study (TRACC).

Author:

Anandappa Gayathri1,Starling Naureen2,Begum Ruwaida3,Bryant Annette4,Sharma Shruti5,Renner Derrick5,Aresu Maria6,Peckitt Clare3,Sethi Himanshu5,Feber Andrew7,Potter Vanessa Alice8,Paraoan Marius9,Abulafi Muti10,George Nicol11,Branagan Graham12,Duff Sarah13,West Nicholas14,Aleshin Alexey5,Chau Ian15,Cunningham David16,

Affiliation:

1. The Royal Marsden NHS Foundation Trust, London, United Kingdom;

2. Royal Marsden Hospital NHS Foundation Trust, London and Surrey, United Kingdom;

3. The Royal Marsden NHS Foundation Trust, London and Surrey, United Kingdom;

4. Royal Marsden NHS Foundation Trust, London and Surrey, United Kingdom;

5. Natera, Inc., San Carlos, CA;

6. Royal Marsden NHS Foundation Trust, Surrey, United Kingdom;

7. Institute of Cancer Research, Sutton, United Kingdom;

8. University Hospital Coventry and Warwickshire, Coventry, United Kingdom;

9. Wrightington, Wigan and Leigh NHS Foundation Trust, Wigan, United Kingdom;

10. Croydon University Hospital, London, United Kingdom;

11. Southend University Hospital, Westcliff on Sea, United Kingdom;

12. Salisbury NHS Foundation Trust, Salisbury, United Kingdom;

13. Manchester University NHS Foundation Trust, Manchester, United Kingdom;

14. Epsom and St. Helier NHS Foundation Trust, Epsom, United Kingdom;

15. The Royal Marsden Hospital NHS Foundation Trust, London, United Kingdom;

16. Royal Marsden Hospital, Sutton, United Kingdom;

Abstract

102 Background: Numerous studies have shown the clinical utility of ctDNA, a non-invasive biomarker to detect MRD and stratify CRC patients who are more likely to relapse. We present an analysis of MRD detection in CRC patients from a prospective multicentre UK study, who were monitored pre- and post-surgery before adjuvant chemotherapy (ACT). Methods: The study recruited patients diagnosed with stage II-III CRC (n=122), including a subset of rectal patients who underwent tri-modality treatment (TMT). All patients had their primary tumor resected and 56% (68/122) received ACT. Paired plasma samples (n=244) were collected before surgery/neaodjuvant chemoradiotherapy and after surgery; median follow-up for survival was 15.48 months (0.16 - 42.1 months). Individual tumors and matched germline DNA were whole-exome sequenced and somatic single nucleotide variants (SNVs) identified. Multiplex PCR assays were designed to track tumor-specific SNVs (Signatera, bespoke mPCR NGS assay) in plasma samples. The study evaluated ctDNA status and clinical outcomes including radiologic imaging. Cox regression was used to calculate recurrence-free survival (RFS) in patients stratified by post-op ctDNA status. Patients were also stratified into low and high-risk groups based on the clinicopathological features. Multivariate analysis was performed with covariates: ctDNA, age, gender, laterality, stage, number of lymph node resected, MSI & TMB. Results: Pre-treatment ctDNA was detected in 93.4% (100/107) of patients. Post-operative ctDNA status prior to ACT was assessed in 107 patients, of whom, 13% (14/107) were MRD-positive (MRDpos). Of the MRDpos patients 42.9% (6/14) eventually relapsed. In contrast, only 8.6% (8/93) of MRD-negative (MRDneg) cases relapsed (HR: 10; 95% CI: 3.3-30; p<0.001). MRD rates stratified by risk features in each of the stages with respective recurrence rates are shown in Table. In stage III patients (n=64), 45.4% (5/11) of the MRDpos patients relapsed, whilst only 17% (9/53) of the MRDneg cases relapsed (HR: 9; 95% CI:2.6-32; p<0.0001). In the multivariate analysis, ctDNA status was the most significant prognostic factor associated with RFS (HR: 28.8, 95% CI: 3.5-234.1; p<0.001). Conclusions: Postoperative ctDNA analysis with tumor informed assay enables detection of CRC patients at high-risk of recurrence. Early detection of MRD could guide ACT decisions in intervention trials and is currently underway in TRACC. Clinical trial information: NCT04050345. [Table: see text]

Funder

National Institute of Health Research Biomedical Research Centre & Royal Marsden Hospital NHS Foundation Trust GI & Lymphoma Unit

Pharmaceutical/Biotech Company

Publisher

American Society of Clinical Oncology (ASCO)

Subject

Cancer Research,Oncology

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