B-DNA structure and stability: the role of hydrogen bonding, π–π stacking interactions, twist-angle, and solvation-Reference-Cited by-同舟云学术

B-DNA structure and stability: the role of hydrogen bonding, π–π stacking interactions, twist-angle, and solvation

Published:2014 Issue:26 Volume:12 Page:4691-4700
ISSN:1477-0520
Container-title:Org. Biomol. Chem.
language:en
Short-container-title:Org. Biomol. Chem.

Author:

Poater Jordi¹²³,Swart Marcel⁴⁵⁶⁷⁸,Bickelhaupt F. Matthias¹²³⁹¹⁰,Fonseca Guerra Célia¹²³

Affiliation:

1. Department of Theoretical Chemistry and Amsterdam Center for Multiscale Modeling

2. VU University Amsterdam

3. NL-1081 HV Amsterdam, The Netherlands

4. Institut de Química Computacional i Catàlisi and Departament de Química

5. Universitat de Girona

6. 17071 Girona, Spain

7. Institució Catalana de Recerca i Estudis Avançats (ICREA)

8. 08010 Barcelona, Spain

9. Institute of Molecules and Materials

10. Radboud University Nijmegen

Abstract

Insight into structure and stability of B-DNA is obtained through systematic quantum chemical analyses of the roles played by hydrogen bonding, π–π stacking, solvation, and twist-angle.

Publisher

Royal Society of Chemistry (RSC)

Subject

Organic Chemistry,Physical and Theoretical Chemistry,Biochemistry

Link

http://pubs.rsc.org/en/content/articlepdf/2014/OB/C4OB00427B

Reference46 articles.

1. Double-Helical → Ladder Structural Transition in the B-DNA is Induced by a Loss of Dispersion Energy

2. Effects of the biological backbone on DNA–protein stacking interactions

3. Energy Component Analysis of π Interactions

4. π-π stacking tackled with density functional theory

5. Selectivity in DNA replication. Interplay of steric shape, hydrogen bonds, π-stacking and solvent effects

Cited by 62 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Effects of Chalcogen Atoms on Excited-State Double-Proton Transfer Behavior for 3,6-bis(4,5-Dihydroxyoxazo-2-yl)benzene-1,2-diol Derivatives: A Computational Investigation;Molecules;2024-01-17

2. Sequence-Specific Fluorescence Turn-On Sensing of RNA by DNA Probes Incorporating the Tricyclic Cytidine Analogue ^DEAtC;Bioconjugate Chemistry;2023-06-05

3. Interaction of an anticancer benzopyrane derivative with DNA: Biophysical, biochemical, and molecular modeling studies;Biochimica et Biophysica Acta (BBA) - General Subjects;2023-06

4. Complementary base pair interactions between different rare tautomers of the second-generation artificial genetic alphabets;Journal of Molecular Modeling;2023-04-04

5. Bibliography;Diagnostic Molecular Biology;2023