Optimizing single cell proteomics using trapped ion mobility spectrometry for label-free experiments

Author:

Mun Dong-Gi1,Bhat Firdous A.1,Ding Husheng1,Madden Benjamin J.2,Natesampillai Sekar3,Badley Andrew D.3,Johnson Kenneth L.2,Kelly Ryan T.4,Pandey Akhilesh156ORCID

Affiliation:

1. Department of Laboratory Medicine and Pathology, Mayo Clinic, 200 First ST SW, Rochester, MN 55905, USA

2. Proteomics Core, Mayo Clinic, Rochester, MN 55905, USA

3. Division of Infectious Diseases, Mayo Clinic, Rochester, MN 55905, USA

4. Department of Chemistry and Biochemistry, Brigham Young University, Provo, Utah 84602, USA

5. Manipal Academy of Higher Education, Manipal, 576104, Karnataka, India

6. Center for Individualized Medicine, Mayo Clinic, Rochester, MN 55905, USA

Abstract

We present optimized settings for ramp times and ion mobility range in trapped ion mobility spectrometry experiments involving single cell analysis.

Funder

National Cancer Institute

Publisher

Royal Society of Chemistry (RSC)

Subject

Electrochemistry,Spectroscopy,Environmental Chemistry,Biochemistry,Analytical Chemistry

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