Homopurine RP-stereodefined phosphorothioate analogs of DNA with hampered Watson–Crick base pairings form Hoogsteen paired parallel duplexes with (2′-OMe)-RNAs

Author:

Maciaszek Anna12345ORCID,Jastrzębska Katarzyna12345ORCID,Guga Piotr12345ORCID

Affiliation:

1. Centre of Molecular and Macromolecular Studies

2. Polish Academy of Sciences

3. Department of Bioorganic Chemistry

4. 90-363 Łódź

5. Poland

Abstract

At pH 7.2, N6-methyl-dA units present in homopurine RP-stereodefined PS-DNA oligomers stabilize Hoogsteen paired duplexes with (2′-OMe)-RNA matrices by 3 °C per modified unit.

Funder

Narodowe Centrum Nauki

Publisher

Royal Society of Chemistry (RSC)

Subject

Organic Chemistry,Physical and Theoretical Chemistry,Biochemistry

Reference48 articles.

1. V. N. Soyfer and V. N.Potaman , Triple–Helical Nucleic Acids , Springer-Verlag , New York , 1996

2. Sequence-Specific Recognition and Modification of Double-Helical DNA by Oligonucleotides

3. Progress in Developments of Triplex-Based Strategies

4. S. T. Crooke , Therapeutic Applications of Oligonucleotides , Springer-Verlag , Heidelberg , 1995

5. Applied Antisense Oligonucleotide Technology , ed. C. A. Stein and A. M. Krieg , John Wiley & Sons , New York , 1998

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