Rationalizing the generation of broad spectrum antibiotics with the addition of a positive charge

Author:

Haloi Nandan1ORCID,Vasan Archit Kumar1,Geddes Emily J.23,Prasanna Arjun34,Wen Po-Chao1ORCID,Metcalf William W.34,Hergenrother Paul J.23ORCID,Tajkhorshid Emad1ORCID

Affiliation:

1. Theoretical and Computational Biophysics Group, NIH Center for Macromolecular Modeling and Bioinformatics, Beckman Institute for Advanced Science and Technology, Department of Biochemistry, Center for Biophysics and Quantitative Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA

2. Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA

3. Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA

4. Department of Microbiology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA

Abstract

A rapid pathway sampling method combining Monte Carlo and graph theory, developed to describe permeation pathways through outer membrane porins, can distinguish between structurally similar analogs with different permeabilities.

Funder

National Institutes of Health

National Science Foundation

National Center for Supercomputing Applications

University of Illinois at Urbana-Champaign

Publisher

Royal Society of Chemistry (RSC)

Subject

General Chemistry

Reference96 articles.

1. Attributable deaths and disability-adjusted life-years caused by infections with antibiotic-resistant bacteria in Switzerland

2. CDC, Antibiotic resistance threats in the United States, 2019. Atlanta, GA: U.S.A

3. US Department of Health and Human Services, Centers for Disease Control and Prevention 2019

4. Molecular Basis of Bacterial Outer Membrane Permeability Revisited

5. Bacterial outer membrane evolution via sporulation?

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