Electron and ion spectroscopy of the cyclo-alanine–alanine dipeptide

Author:

Chiarinelli Jacopo1ORCID,Barreiro-Lage Darío2ORCID,Bolognesi Paola1ORCID,Richter Robert3ORCID,Zettergren Henning4ORCID,Stockett Mark H.4ORCID,Díaz-Tendero Sergio256ORCID,Avaldi Lorenzo1ORCID

Affiliation:

1. Institute of Structure of Matter-CNR (ISM-CNR), 00015 Monterotondo, Italy

2. Departamento de Química, Universidad Autónoma de Madrid, 28049 Madrid, Spain

3. Elettra Sincrotrone Trieste, 34149 Basovizza, Trieste, Italy

4. Department of Physics, Stockholm University, Se-10691 Stockholm, Sweden

5. Condensed Matter Physics Center (IFIMAC), Universidad Autónoma de Madrid, 28049 Madrid, Spain

6. Institute for Advanced Research in Chemical Science (IAdChem), Universidad Autónoma de Madrid, 28049 Madrid, Spain

Abstract

The VUV photoionisation and photofragmentation of cyclo-alanine-alanine (cAA) has been studied in a joint experimental and theoretical work. The photoelectron spectrum and the photoelectronphotoion coincidence (PEPICO) measurements, which enable control of the energy being deposited, combined with quantum chemistry calculations, provide direct insight into the cAA molecular stability after photoionisation. The analysis of the ion-neutral coincidence experiments with the molecular dynamics simulations and the exploration of the potential energy surface allows a complete identification of the fragmentation pathways. It has been found that the fragmentation always start with the ring opening through the C–C bond cleavage, followed by release of neutral moieties CO or HNCO.

Funder

European Cooperation in Science and Technology

Ministerio de Ciencia e Innovación

Vetenskapsrådet

Publisher

Royal Society of Chemistry (RSC)

Subject

Physical and Theoretical Chemistry,General Physics and Astronomy

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