Controlled destabilization of caged circularized DNA oligonucleotides predicted by replica exchange molecular dynamics simulations-Reference-Cited by-同舟云学术

Controlled destabilization of caged circularized DNA oligonucleotides predicted by replica exchange molecular dynamics simulations

Published:2023 Issue:38 Volume:25 Page:26132-26144
ISSN:1463-9076
Container-title:Physical Chemistry Chemical Physics
language:en
Short-container-title:Phys. Chem. Chem. Phys.

Author:

Hamerla Carsten¹,Mondal Padmabati²^ORCID,Hegger Rainer¹,Burghardt Irene¹^ORCID

Affiliation:

1. Institute of Physical and Theoretical Chemistry, Goethe University Frankfurt, Max-von-Laue-Str. 7, 60438 Frankfurt am Main, Germany

2. Department of Chemistry and Center for Atomic, Molecular, and Optical Sciences and Technologies (CAMOST), Indian Institute of Science Education and Research (IISER) Tirupati, Panguru (G.P), Yerpedu Mandal, 517619 - Tirupati Dist., Andhra Pradesh, India

Abstract

Replica exchange molecular dynamics (REMD) simulations are employed to compute melting temperatures of caged circularized DNA oligonucleotides, contributing to novel schemes for the tailored photocontrol of nucleic acids.

Funder

Deutsche Forschungsgemeinschaft

Publisher

Royal Society of Chemistry (RSC)

Subject

Physical and Theoretical Chemistry,General Physics and Astronomy

Link

http://pubs.rsc.org/en/content/articlepdf/2023/CP/D3CP02961A

Reference97 articles.

1. Light‐Controlled Tools

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