DNA-protamine condensates under low salt conditions: molecular dynamics simulation with a simple coarse-grained model focusing on electrostatic interactions-Reference-Cited by-同舟云学术

DNA-protamine condensates under low salt conditions: molecular dynamics simulation with a simple coarse-grained model focusing on electrostatic interactions

Published:2023 Issue:18 Volume:5 Page:4798-4808
ISSN:2516-0230
Container-title:Nanoscale Advances
language:en
Short-container-title:Nanoscale Adv.

Author:

Jang Yun Hee¹²³^ORCID,Raspaud Eric³,Lansac Yves¹²³^ORCID

Affiliation:

1. GREMAN UMR 7347, Université de Tours, CNRS, INSA CVL, 37200 Tours, France

2. Department of Energy Science and Engineering, DGIST, Daegu 42988, Korea

3. Laboratoire de Physique des Solides, CNRS UMR 8502, Université Paris-Saclay, 91405 Orsay, France

Abstract

Simple coarse-grained model with long-range electrostatic interactions providing a nanoscale picture of DNA aggregation–redissolution behaviours controlled by protamine-DNA charge ratios and protamine length in low-salt regime.

Funder

National Research Foundation of Korea

Korea Institute of Science and Technology Information

Publisher

Royal Society of Chemistry (RSC)

Subject

General Engineering,General Materials Science,General Chemistry,Atomic and Molecular Physics, and Optics,Bioengineering

Link

http://pubs.rsc.org/en/content/articlepdf/2023/NA/D2NA00847E

Reference101 articles.

1. Electrostatics of DNA compaction in viruses, bacteria and eukaryotes: functional insights and evolutionary perspective

2. Organization of Chromatin by Intrinsic and Regulated Phase Separation

3. RNA-Mediated Feedback Control of Transcriptional Condensates

4. Biomolecular condensates as arbiters of biochemical reactions inside the nucleus

5. Reentrant Phase Transitions and Non-Equilibrium Dynamics in Membraneless Organelles

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