Mechanical properties of DNA and DNA nanostructures: comparison of atomistic, Martini and oxDNA models-Reference-Cited by-同舟云学术

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Mechanical properties of DNA and DNA nanostructures: comparison of atomistic, Martini and oxDNA models

Published:2021 Issue:25 Volume:9 Page:5102-5113
ISSN:2050-750X
Container-title:Journal of Materials Chemistry B
language:en
Short-container-title:J. Mater. Chem. B

Author:

Naskar Supriyo¹²³⁴⁵^ORCID,Maiti Prabal K.¹²³⁴⁵^ORCID

Affiliation:

1. Center for Condensed Matter Theory

2. Department of Physics

3. Indian Institute of Science

4. Bangalore

5. India

Abstract

A multiscale molecular simulation study of the elasticity of DNA and DNA based nanostructures was conducted.

Funder

Council of Scientific and Industrial Research, India

Department of Atomic Energy, Government of India

Publisher

Royal Society of Chemistry (RSC)

Subject

General Materials Science,Biomedical Engineering,General Chemistry,General Medicine

Link

http://pubs.rsc.org/en/content/articlepdf/2021/TB/D0TB02970J

Reference104 articles.

1. Mechanics of DNA packaging in viruses

2. The structure of DNA in the nucleosome core

3. Atomistic Simulation of Stacked Nucleosome Core Particles: Tail Bridging, the H4 Tail, and Effect of Hydrophobic Forces

4. Orientation Dependence of Inter-NCP Interaction: Insights into the Behavior of Liquid Crystal Phase and Chromatin Fiber Organization

5. Structure and Dynamics of DNA−Dendrimer Complexation: Role of Counterions, Water, and Base Pair Sequence

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1. Fluctuations cutoff in a 1D Hamiltonian model for DNA;Physica Scripta;2024-08-14

2. Supercoiled DNA Minicircles under Double-strand Breaks;Chinese Journal of Polymer Science;2024-03-29

3. Influence of temperature on bend, twist and twist–bend coupling of dsDNA;Physical Chemistry Chemical Physics;2024

4. Correlated Hybrid DNA Structures Explored by the oxDNA Model;Langmuir;2023-12-28

5. The Response of the Replication Apparatus to Leading Template Strand Blocks;Cells;2023-11-11

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