Development of PCR primers enabling the design of flexible sticky ends for efficient concatenation of long DNA fragments

Author:

Nomura Kohei1,Onda Kaoru1,Murase Hirotaka1,Hashiya Fumitaka23,Ono Yukiteru4,Terai Goro4,Oka Natsuhisa5ORCID,Asai Kiyoshi4,Suzuki Daisuke1,Takahashi Naho1,Hiraoka Haruka1ORCID,Inagaki Masahito1,Kimura Yasuaki1ORCID,Shimizu Yoshihiro6,Abe Naoko1,Abe Hiroshi1237ORCID

Affiliation:

1. Department of Chemistry, Graduate School of Science, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Aichi 464-8602, Japan

2. Research Center for Materials Science, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Aichi 464-8602, Japan

3. CREST, Japan Science and Technology Agency, 7 Gobancho, Chiyoda-ku, Tokyo 102-0076, Japan

4. Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, University of Tokyo, Kashiwanoha, Kashiwa, Chiba 277-8561, Japan

5. Department of Chemistry and Biomolecular Science Faculty of Engineering, Gifu University, Gifu 501-1193, Japan

6. Laboratory for Cell-Free Protein Synthesis, RIKEN Center for Biosystems Dynamics Research, Suita, Osaka 565-0874, Japan

7. Institute for Glyco-core Research (iGCORE), Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Aichi 464-8601, Japan

Abstract

We report on chemically modified PCR primers that enable the design of flexible sticky ends by introducing a photo-cleavable group at the phosphate moiety. DNA fragments synthesized using these primers can be ligated with higher efficiency.

Funder

Core Research for Evolutional Science and Technology

Japan Agency for Medical Research and Development

Publisher

Royal Society of Chemistry (RSC)

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