Towards a machine-readable literature: finding relevant papers based on an uploaded powder diffraction pattern

Author:

Özer BerrakORCID,Karlsen Martin A.ORCID,Thatcher Zachary,Lan LingORCID,McMahon BrianORCID,Strickland Peter R.ORCID,Westrip Simon P.ORCID,Sang Koh S.,Billing David G.ORCID,Ravnsbæk Dorthe B.ORCID,Billinge Simon J. L.ORCID

Abstract

A prototype application for machine-readable literature is investigated. The program is called pyDataRecognition and serves as an example of a data-driven literature search, where the literature search query is an experimental data set provided by the user. The user uploads a powder pattern together with the radiation wavelength. The program compares the user data to a database of existing powder patterns associated with published papers and produces a rank ordered according to their similarity score. The program returns the digital object identifier and full reference of top-ranked papers together with a stack plot of the user data alongside the top-five database entries. The paper describes the approach and explores successes and challenges.

Funder

National Science Foundation

Carlsbergfondet

Publisher

International Union of Crystallography (IUCr)

Subject

Inorganic Chemistry,Physical and Theoretical Chemistry,Condensed Matter Physics,General Materials Science,Biochemistry,Structural Biology

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