Empirical correction for resolution- and temperature-dependent errors caused by factors such as thermal diffuse scattering

Author:

Niepötter Benedikt,Herbst-Irmer Regine,Stalke Dietmar

Abstract

Charge density investigations of the compounds [Mg{(pz*)3C}2] (1) (pz* = 3,5-dimethylpyrazolyl) and (Ph2P=S)C14H9(2) show two disturbing features in each case. First, the models derived from high-resolution data sets at different temperatures differ significantly. Additionally, residual density appears close to or even at the atomic positions, especially for data sets measured at 100 K. This indicates significant errors that could be caused by thermal diffuse scattering (TDS). A reduction of the integration box size leads to a substantial improvement in the model quality and removes the differences in the models. At the same time it indicates TDS to be the reason for these errors. However, this method is very time consuming and an alternative is needed. In endeavouring to improve the method, it was noticed that the refinement of resolution-dependent scale factors can be employed as a validation tool to detect such errors. In a nested interval approach, a correction factor {α =a[sin(θ)/λ]2+b[sin(θ)/λ]3} is determined that minimizes these errors and improves the model quality. This model is now based on refinement of only a single scale factor.

Publisher

International Union of Crystallography (IUCr)

Subject

General Biochemistry, Genetics and Molecular Biology

Reference52 articles.

1. Normal probability plot analysis of error in measured and derived quantities and standard deviations

2. Alexandropoulos, N. G., Cooper, M. J., Suortti, P. & Willis, B. T. M. (2006). International Tables for Crystallography, Vol. C, Mathematical, Physical and Chemical Tables, edited by E. Prince, pp. 653-665. 1st online ed. Chester: International Union of Crystallography.

3. Bond lengths in organic and metal-organic compounds revisited:X—H bond lengths from neutron diffraction data

4. Bader, R. F. W. (1990). Atoms in Molecules: A Quantum Theory. Oxford, New York: Clarendon Press.

5. Messung der elastischen und inelastischen Streuanteile im Bereich der Bragg-Reflexe eines Pentaerythrit-Einkristalls mit Hilfe von Mössbauer-Quelle und -Absorber

Cited by 28 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3