Two phases of C9H12O4: why is the structure at 295 K so complicated?

Author:

Duncan Laura L.,Patrick Brian O.,Brock Carolyn Pratt

Abstract

Molecules of 4,4′-dimethyl-2-hydroxy-6-oxocyclohexene-1-carboxylic acid, C9H12O4, crystallize at 295 K in a modulated superstructure with five half-molecules in the asymmetric unit; each molecule is located on one of the mirror planes of the space group Cmc21. Reflections with k ≠ 5n are systematically weak; a satisfactory refinement can be obtained in a Cmcm pseudocell having b′ = b/5. The important modulation involves small rotations of the molecules around axes perpendicular to the mirror plane; there is also an up/down disorder of the CMe2 fragment in four of the five molecules (two molecules with occupancy factors ca 4:1; two with occupancy factors ca 3:2). The modulation is a response to packing problems that can be traced to the differences between the thin, electron- and oxygen-rich `head' of the molecule and the thicker, methyl-rich `tail'. At 130 K the length of b is reduced by 2/5 and the Pmnb structure is ordered. Both structures can be described as modulated variants of the Cmcm substructure; the wavevectors are 2b′*/5 for the room-temperature structure and b′*/2 for the low-temperature structure, where b′* is the reciprocal axis of the subcell. The structure at room temperature can also be understood as a hybrid of the fully disordered pseudocell structure and the ordered structure that is found at low temperature.

Publisher

International Union of Crystallography (IUCr)

Subject

General Biochemistry, Genetics and Molecular Biology,General Medicine

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