Rietveld refinement and structure verification using `Morse' restraints

Author:

Bushmarinov Ivan S.,Dmitrienko Artem O.,Korlyukov Alexander A.,Antipin Mikhail Yu.

Abstract

A new restraint scheme for Rietveld refinement based on Morse bond energy potential is introduced, in which the asymmetry of the Morse potential allows the refinement to `break' the incorrectly placed bonds. The analysis of bond-length distributions at different values of restraint strength reveals a visible difference in behavior of wrong and correct structures, which can be detected using robust statistical methods. This fact is employed as a basis for a novel structure verification criterion. The approach is demonstrated on known difficult cases of acetolone and γ-quinacridone and used for the Rietveld refinement ofN-(6-phenylhexanoyl)glycyl-L-tryptophanamide, an organic molecule of a potential anxiolytic containing 32 non-H atoms and 14 single bonds. The results are verified using density functional theory calculations with periodic boundary conditions.

Publisher

International Union of Crystallography (IUCr)

Subject

General Biochemistry, Genetics and Molecular Biology

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