Structural and biochemical characterization of the novel serpin Iripin-5 from Ixodes ricinus

Author:

Kascakova BarboraORCID,Kotal JanORCID,Martins Larissa Almeida,Berankova ZuzanaORCID,Langhansova HelenaORCID,Calvo EricORCID,Crossley Joel A.ORCID,Havlickova PetraORCID,Dycka Filip,Prudnikova TatyanaORCID,Kuty MichalORCID,Kotsyfakis MichailORCID,Chmelar JindrichORCID,Kuta Smatanova IvanaORCID

Abstract

Iripin-5 is the main Ixodes ricinus salivary serpin, which acts as a modulator of host defence mechanisms by impairing neutrophil migration, suppressing nitric oxide production by macrophages and altering complement functions. Iripin-5 influences host immunity and shows high expression in the salivary glands. Here, the crystal structure of Iripin-5 in the most thermodynamically stable state of serpins is described. In the reactive-centre loop, the main substrate-recognition site of Iripin-5 is likely to be represented by Arg342, which implies the targeting of trypsin-like proteases. Furthermore, a computational structural analysis of selected Iripin-5–protease complexes together with interface analysis revealed the most probable residues of Iripin-5 involved in complex formation.

Funder

European Regional Development Fund, MEYS

Grantová Agentura České Republiky

Jihočeská Univerzita v Českých Budějovicích

Publisher

International Union of Crystallography (IUCr)

Subject

Structural Biology

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