Novel approaches for the lipid sponge phase crystallization of the Rhodobacter sphaeroides photosynthetic reaction center

Author:

Selikhanov GeorgiiORCID,Fufina TatianaORCID,Vasilieva LyudmilaORCID,Betzel Christian,Gabdulkhakov AzatORCID

Abstract

With the recent developments in the field of free-electron-laser-based serial femtosecond crystallography, the necessity to obtain a large number of high-quality crystals has emerged. In this work crystallization techniques were selected, tested and optimized for the lipid mesophase crystallization of the Rhodobacter sphaeroides membrane pigment-protein complex, known as the photosynthetic reaction center (RC). Novel approaches for lipid sponge phase crystallization in comparatively large volumes using Hamilton gas-tight glass syringes and plastic pipetting tips are described. An analysis of RC crystal structures obtained by lipid mesophase crystallization revealed non-native ligands that displaced the native electron-transfer cofactors (carotenoid spheroidene and a ubiquinone molecule) from their binding pockets. These ligands were identified and were found to be lipids that are major mesophase components. The selection of distinct co-crystallization conditions with the missing cofactors facilitated the restoration of spheroidene in its binding site.

Funder

Russian Foundation for Basic Research

Deutsche Forschungsgemeinschaft

Bundesministerium für Bildung und Forschung

Publisher

International Union of Crystallography (IUCr)

Subject

Condensed Matter Physics,General Materials Science,Biochemistry,General Chemistry

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