Community recommendations on cryoEM data archiving and validation

Author:

Kleywegt Gerard J.ORCID,Adams Paul D.ORCID,Butcher Sarah J.ORCID,Lawson Catherine L.,Rohou AlexisORCID,Rosenthal Peter B.ORCID,Subramaniam SriramORCID,Topf MayaORCID,Abbott SanjaORCID,Baldwin Philip R.ORCID,Berrisford John M.ORCID,Bricogne GérardORCID,Choudhary PreetiORCID,Croll Tristan I.ORCID,Danev RadostinORCID,Ganesan Sai J.ORCID,Grant TimothyORCID,Gutmanas AleksandrasORCID,Henderson RichardORCID,Heymann J. BernardORCID,Huiskonen Juha T.ORCID,Istrate AndreiORCID,Kato TakayukiORCID,Lander Gabriel C.ORCID,Lok Shee-MeiORCID,Ludtke Steven J.ORCID,Murshudov Garib N.ORCID,Pye RyanORCID,Pintilie Grigore D.ORCID,Richardson Jane S.ORCID,Sachse CarstenORCID,Salih OsmanORCID,Scheres Sjors H. W.ORCID,Schroeder Gunnar F.ORCID,Sorzano Carlos Oscar S.ORCID,Stagg Scott M.ORCID,Wang ZheORCID,Warshamanage RanganaORCID,Westbrook John D.ORCID,Winn Martyn D.ORCID,Young Jasmine Y.ORCID,Burley Stephen K.ORCID,Hoch Jeffrey C.ORCID,Kurisu GenjiORCID,Morris KyleORCID,Patwardhan ArdanORCID,Velankar SameerORCID

Abstract

In January 2020, a workshop was held at EMBL-EBI (Hinxton, UK) to discuss data requirements for the deposition and validation of cryoEM structures, with a focus on single-particle analysis. The meeting was attended by 47 experts in data processing, model building and refinement, validation, and archiving of such structures. This report describes the workshop's motivation and history, the topics discussed, and the resulting consensus recommendations. Some challenges for future methods-development efforts in this area are also highlighted, as is the implementation to date of some of the recommendations.

Funder

Wellcome Trust

National Science Foundation

U.S. Department of Energy

National Institutes of Health, National Institute of General Medical Sciences

Publisher

International Union of Crystallography (IUCr)

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