Diffuse scattering and Monte Carlo simulations of cyclohexane–perhydrotriphenylene (PHTP) inclusion compounds, C6H12/C18H30

Author:

Mayo S. C.,Proffen Th.,Bown M.,Welberry T. R.

Abstract

A recently developed method for fitting a Monte Carlo computer simulation model to observed single-crystal diffuse X-ray scattering has been applied to (hk0) scattering data obtained for the guest–host system (inclusion compound) cyclohexane–perhydrotriphenylene (cyclohexane–PHTP), C6H12/C18H30, at 295 K. A simple two-dimensional model representing the projection of the structure downcwas used, which allowed refinement of short-range order parameters describing the mutual orientation of guest molecules within neighbouring channels, together with a parameter describing the coupling of these orientations to distortions of the host framework. Since the guest site still appears very disordered in projection, only a crude model for the shape of the guest molecule was used. The resulting calculated diffraction patterns showed good qualitative agreement with the observed pattern, but quantitatively the achieved agreement factor (R≃ 38%) was considerably higher than that achieved in comparable studies of a different system. Calculations of the contribution to the diffraction pattern of the guest alone and the host alone clearly indicate that the host framework distortion is modelled well, but the guest is not so well described. The lattice distortion revealed by the study indicates a tendency for the hexagonal network to distort towards local monoclinicity. This is consistent with the observation that at ~273 K, the compound undergoes a reversible phase transition to a micro-twinned monoclinic phase.

Publisher

International Union of Crystallography (IUCr)

Subject

General Biochemistry, Genetics and Molecular Biology

Cited by 12 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

1. Inclusion Compounds Containing Polymers;Kirk-Othmer Encyclopedia of Chemical Technology;2016-12-15

2. Determining Molecular Orientations in Disordered Materials from X-ray Linear Dichroism at the Iodine L1-Edge;Journal of the American Chemical Society;2016-12-09

3. One hundred years of diffuse scattering;Crystallography Reviews;2015-07-14

4. Diffuse scattering and partial disorder in complex structures;IUCrJ;2014-10-28

5. Structure of Nanoparticles from Total Scattering;Modern Diffraction Methods;2013-01-14

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