Crystal structures of a subunit of the formylglycinamide ribonucleotide amidotransferase, PurS, fromThermus thermophilus,Sulfolobus tokodaiiandMethanocaldococcus jannaschii

Author:

Watanabe Yuzo,Yanai Hisaaki,Kanagawa Mayumi,Suzuki Sakiko,Tamura Satoko,Okada Kiyoshi,Baba Seiki,Kumasaka Takashi,Agari Yoshihiro,Chen Lirong,Fu Zheng-Qing,Chrzas John,Wang Bi-Cheng,Nakagawa Noriko,Ebihara Akio,Masui Ryoji,Kuramitsu Seiki,Yokoyama Shigeyuki,Sampei Gen-ichi,Kawai Gota

Abstract

The crystal structures of a subunit of the formylglycinamide ribonucleotide amidotransferase, PurS, fromThermus thermophilus,Sulfolobus tokodaiiandMethanocaldococcus jannaschiiwere determined and their structural characteristics were analyzed. For PurS fromT. thermophilus, two structures were determined using two crystals that were grown in different conditions. The four structures in the dimeric form were almost identical to one another despite their relatively low sequence identities. This is also true for all PurS structures determined to date. A few residues were conserved among PurSs and these are located at the interaction site with PurL and PurQ, the other subunits of the formylglycinamide ribonucleotide amidotransferase. Molecular-dynamics simulations of the PurS dimer as well as a model of the complex of the PurS dimer, PurL and PurQ suggest that PurS plays some role in the catalysis of the enzyme by its bending motion.

Publisher

International Union of Crystallography (IUCr)

Subject

Condensed Matter Physics,Genetics,Biochemistry,Structural Biology,Biophysics

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