An adaptive decorrelation method removes Illumina DNA base-calling errors caused by crosstalk between adjacent clusters
Author:
Publisher
Springer Science and Business Media LLC
Subject
Multidisciplinary
Link
http://www.nature.com/articles/srep41348.pdf
Reference15 articles.
1. Li, L. & Speed, T. P. An estimate of the crosstalk matrix in four-dye fluorescence-based DNA sequencing. Electrophoresis 20, 1433–1442, doi: 10.1002/(SICI)1522-2683(19990601)20:7<1433::AID-ELPS1433>3.0.CO;2-0 (1999).
2. Whiteford, N. et al. Swift: primary data analysis for the Illumina Solexa sequencing platform. Bioinformatics 25, 2194–2199, doi: 10.1093/bioinformatics/btp383 (2009).
3. Renaud, G., Kircher, M., Stenzel, U. & Kelso, J. freeIbis: an efficient basecaller with calibrated quality scores for Illumina sequencers. Bioinformatics 29, 1208–1209, doi: 10.1093/bioinformatics/btt117 (2013).
4. Massingham, T. & Goldman, N. All Your Base: a fast and accurate probabilistic approach to base calling. Genome Biol 13, R13, doi: 10.1186/gb-2012-13-2-r13 (2012).
5. Langmead, B. & Salzberg, S. L. Fast gapped-read alignment with Bowtie 2. Nat Methods 9, 357–359, doi: 10.1038/nmeth.1923 (2012).
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