MNase titration reveals differences between nucleosome occupancy and chromatin accessibility-Reference-Cited by-同舟云学术

MNase titration reveals differences between nucleosome occupancy and chromatin accessibility

Published:2016-05-06 Issue:1 Volume:7 Page:
ISSN:2041-1723
Container-title:Nature Communications
language:en
Short-container-title:Nat Commun

Author:

Mieczkowski Jakub,Cook April,Bowman Sarah K.,Mueller Britta,Alver Burak H.,Kundu Sharmistha,Deaton Aimee M.,Urban Jennifer A.,Larschan Erica,Park Peter J.^ORCID,Kingston Robert E.,Tolstorukov Michael Y.

Publisher

Springer Science and Business Media LLC

Subject

General Physics and Astronomy,General Biochemistry, Genetics and Molecular Biology,General Chemistry

Link

http://www.nature.com/articles/ncomms11485.pdf

Reference46 articles.

1. Kornberg, R. D. Chromatin structure: a repeating unit of histones and DNA. Science 184, 868–871 (1974).

2. Luger, K., Mader, A. W., Richmond, R. K., Sargent, D. F. & Richmond, T. J. Crystal structure of the nucleosome core particle at 2.8 Å resolution. Nature 389, 251–260 (1997).

3. Almer, A., Rudolph, H., Hinnen, A. & Horz, W. Removal of positioned nucleosomes from the yeast PHO5 promoter upon PHO5 induction releases additional upstream activating DNA elements. EMBO J. 5, 2689–2696 (1986).

4. Wolffe, A. P. & Brown, D. D. Developmental regulation of two 5S ribosomal RNA genes. Science 241, 1626–1632 (1988).

5. Li, B., Carey, M. & Workman, J. L. The role of chromatin during transcription. Cell 128, 707–719 (2007).

Cited by 197 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Identification of Accessible Chromatin Regions with MNase-seq;BIO-PROTOCOL;2025

2. Profiling of chromatin accessibility and regulatory elements toward understanding the mechanisms underlying growth regulation in the Pacific oyster (Crassostrea gigas);Aquaculture;2025-01

3. Chromatin and gene regulation in archaea;Molecular Microbiology;2024-08-03

4. nucMACC: An MNase-seq pipeline to identify structurally altered nucleosomes in the genome;Science Advances;2024-07-05

5. Genome wide nucleosome landscape shapes 3D chromatin organization;Science Advances;2024-06-07