Co-evolution of interacting proteins through non-contacting and non-specific mutations-Reference-Cited by-同舟云学术

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Co-evolution of interacting proteins through non-contacting and non-specific mutations

Published:2022-03-31 Issue:5 Volume:6 Page:590-603
ISSN:2397-334X
Container-title:Nature Ecology & Evolution
language:en
Short-container-title:Nat Ecol Evol

Author:

Ding David,Green Anna G.,Wang Boyuan,Lite Thuy-Lan Vo^ORCID,Weinstein Eli N.,Marks Debora S.,Laub Michael T.^ORCID

Funder

Boehringer Ingelheim Fonds

Ashford PhD fellowship

U.S. Department of Health & Human Services | National Institutes of Health

Jane Coffin Childs Memorial Fund for Medical Research

Hertz Foundation

Howard Hughes Medical Institute

Publisher

Springer Science and Business Media LLC

Subject

Ecology,Ecology, Evolution, Behavior and Systematics

Link

https://www.nature.com/articles/s41559-022-01688-0.pdf

Reference75 articles.

1. Green, A. G. et al. Large-scale discovery of protein interactions at residue resolution using co-evolution calculated from genomic sequences. Nat. Commun. 12, 1396 (2021).

2. Cong, Q., Anishchenko, I., Ovchinnikov, S. & Baker, D. Protein interaction networks revealed by proteome coevolution. Science 365, 185–189 (2019).

3. Ovchinnikov, S., Kamisetty, H. & Baker, D. Robust and accurate prediction of residue–residue interactions across protein interfaces using evolutionary information. eLife 3, e02030 (2014).

4. Hopf, T. A. et al. Sequence co-evolution gives 3D contacts and structures of protein complexes. eLife 3, e03430 (2014).

5. Kondrashov, A. S., Sunyaev, S. & Kondrashov, F. A. Dobzhansky–Muller incompatibilities in protein evolution. Proc. Natl Acad. Sci. USA 99, 14878–14883 (2002).

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