High-resolution SAR11 ecotype dynamics at the Bermuda Atlantic Time-series Study site by phylogenetic placement of pyrosequences-Reference-Cited by-同舟云学术

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High-resolution SAR11 ecotype dynamics at the Bermuda Atlantic Time-series Study site by phylogenetic placement of pyrosequences

Published:2013-03-07 Issue:7 Volume:7 Page:1322-1332
ISSN:1751-7362
Container-title:The ISME Journal
language:en
Short-container-title:ISME J

Author:

Vergin Kevin L,Beszteri Bánk,Monier Adam,Cameron Thrash J,Temperton Ben,Treusch Alexander H,Kilpert Fabian,Worden Alexandra Z,Giovannoni Stephen J

Publisher

Springer Science and Business Media LLC

Subject

Ecology, Evolution, Behavior and Systematics,Microbiology

Link

http://www.nature.com/articles/ismej201332.pdf

Reference59 articles.

1. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ . (1990). Basic local alignment search tool. J Mol Biol 215: 403–410.

2. Berger SA, Krompass D, Stamatakis A . (2011). Performance, accuracy, and web server for evolutionary placement of short sequence reads under maximum likelihood. Syst Biol 60: 291–302.

3. Binladen J, Gilbert MTP, Bollback JP, Panitz F, Bendixen C, Nielsen R et al (2007). The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing. PLoS One 2: e197.

4. Brindefalk B, Ettema TJ, Viklund J, Thollesson M, Andersson SG . (2011). A phylometagenomic exploration of oceanic alphaproteobacteria reveals mitochondrial relatives unrelated to the SAR11 clade. PLoS One 6: e24457.

5. Brown MV, Lauro FM, DeMaere MZ, Muir L, Wilkins D, Thomas T et al (2012). Global biogeography of SAR11 marine bacteria. Mol Syst Biol 8: 595.

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