Bias in assessments of marine SAR11 biodiversity in environmental fosmid and BAC libraries?
Author:
Publisher
Springer Science and Business Media LLC
Subject
Ecology, Evolution, Behavior and Systematics,Microbiology
Link
http://www.nature.com/articles/ismej200980.pdf
Reference19 articles.
1. Alonso-Sáez L, Balagué V, Sà EL, Sánchez O, González JM, Pinhassi J et al. 2007 Seasonality in bacterial diversity in north-west Mediterranean coastal waters: assessment through clone libraries, fingerprinting and FISH FEMS Microbiol Ecol 60 98–112
2. Béjà O 2004 To BAC or not to BAC: marine ecogenomics Curr Opin Biotechnol 15 187–190
3. Béjà O, Suzuki MT, Koonin EV, Aravind L, Hadd A, Nguyen LP et al. 2000a Construction and analysis of bacterial artificial chromosome libraries from a marine microbial assemblage Environ Microbiol 2 516–529
4. Béjà O, Aravind L, Koonin EV, Suzuki MT, Hadd A, Nguyen LP et al. 2000b Bacterial rhodopsin: evidence for a new type of phototrophy in the sea Science 289 1902–1906
5. DeLong EF, Preston CM, Mincer T, Rich V, Hallam SJ, Frigaard N-U et al. 2006 Community genomics among stratified microbial assemblages in the ocean's interior Science 311 496–503
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1. Functional metagenomic screen reveals new and diverse microbial rhodopsins;The ISME Journal;2016-02-19
2. Strong spurious transcription likely contributes to DNA insert bias in typical metagenomic clone libraries;Microbiome;2015-05-20
3. Bacterial, archaeal and viral-like rhodopsins from the Red Sea;Environmental Microbiology Reports;2013-02-17
4. Preparation of BAC Libraries from Marine Microbial Populations;Methods in Enzymology;2013
5. Fosmid System;Encyclopedia of Metagenomics;2013
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