High-quality genome (re)assembly using chromosomal contact data-Reference-Cited by-同舟云学术

High-quality genome (re)assembly using chromosomal contact data

Published:2014-12 Issue:1 Volume:5 Page:
ISSN:2041-1723
Container-title:Nature Communications
language:en
Short-container-title:Nat Commun

Author:

Marie-Nelly Hervé,Marbouty Martial,Cournac Axel,Flot Jean-François,Liti Gianni,Parodi Dante Poggi,Syan Sylvie,Guillén Nancy,Margeot Antoine,Zimmer Christophe,Koszul Romain

Publisher

Springer Science and Business Media LLC

Subject

General Physics and Astronomy,General Biochemistry, Genetics and Molecular Biology,General Chemistry

Link

http://www.nature.com/articles/ncomms6695.pdf

Reference46 articles.

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2. Bradnam, K. R. et al. Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species. GigaScience 2, 10 (2013).

3. Mak, H. C. Genome interpretation and assembly—recent progress and next steps. Nat. Biotechnol. 30, 1081–1083 (2012).

4. Alkan, C., Sajjadian, S. & Eichler, E. E. Limitations of next-generation genome sequence assembly. Nat. Methods 8, 61–65 (2011).

5. Huddleston, J. et al. Reconstructing complex regions of genomes using long-read sequencing technology. Genome Res. 24, 688–696 (2014).

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