Investigating open reading frames in known and novel transcripts using ORFanage-Reference-Cited by-同舟云学术

登录注册会员服务联系我们

Investigating open reading frames in known and novel transcripts using ORFanage

Published:2023-07-31 Issue:8 Volume:3 Page:700-708
ISSN:2662-8457
Container-title:Nature Computational Science
language:en
Short-container-title:Nat Comput Sci

Author:

Varabyou Ales^ORCID,Erdogdu Beril,Salzberg Steven L.^ORCID,Pertea Mihaela^ORCID

Funder

U.S. Department of Health & Human Services | NIH | National Human Genome Research Institute

U.S. Department of Health & Human Services | NIH | National Institute of Mental Health

U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences

NSF | BIO | Division of Biological Infrastructure

Publisher

Springer Science and Business Media LLC

Subject

Computer Networks and Communications,Computer Science Applications,Computer Science (miscellaneous)

Link

https://www.nature.com/articles/s43588-023-00496-1.pdf

Reference68 articles.

1. O’Leary, N. A. et al. Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion and functional annotation. Nucleic Acids Res. 44, D733–D745 (2016).

2. Frankish, A. et al. GENCODE: reference annotation for the human and mouse genomes in 2023. Nucleic Acids Res. 51, D942–D949 (2023).

3. Pertea, M. et al. CHESS: a new human gene catalog curated from thousands of large-scale RNA sequencing experiments reveals extensive transcriptional noise. Genome Biol. 19, 208 (2018).

4. Varabyou, A. et al. CHESS 3: an improved, comprehensive catalog of human genes and transcripts based on large-scale expression data, phylogenetic analysis and protein structure. Preprint at bioRxiv https://doi.org/10.1101/2022.12.21.521274 (2022).

5. Salzberg, S. L. Open questions: how many genes do we have? BMC Biol. 16, 94 (2018).

Cited by 6 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Design of multicomponent thermosetting polymers with enhanced tensile properties through active learning;Composites Science and Technology;2024-09

2. Sequence-specific targeting of intrinsically disordered protein regions;2024-07-16

3. No country for old methods: New tools for studying microproteins;iScience;2024-02

4. Landscape of enhancer disruption and functional screen in melanoma cells;Genome Biology;2023-10-30

5. CHESS 3: an improved, comprehensive catalog of human genes and transcripts based on large-scale expression data, phylogenetic analysis, and protein structure;Genome Biology;2023-10-30

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号京ICP备18003416号-3