Use of simulated data sets to evaluate the fidelity of metagenomic processing methods-Reference-Cited by-同舟云学术

Use of simulated data sets to evaluate the fidelity of metagenomic processing methods

Published:2007-04-29 Issue:6 Volume:4 Page:495-500
ISSN:1548-7091
Container-title:Nature Methods
language:en
Short-container-title:Nat Methods

Author:

Mavromatis Konstantinos,Ivanova Natalia,Barry Kerrie,Shapiro Harris,Goltsman Eugene,McHardy Alice C,Rigoutsos Isidore,Salamov Asaf,Korzeniewski Frank,Land Miriam,Lapidus Alla,Grigoriev Igor,Richardson Paul,Hugenholtz Philip,Kyrpides Nikos C

Publisher

Springer Science and Business Media LLC

Subject

Cell Biology,Molecular Biology,Biochemistry,Biotechnology

Link

http://www.nature.com/articles/nmeth1043.pdf

Reference24 articles.

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2. Venter, J.C. et al. Environmental genome shotgun sequencing of the Sargasso Sea. Science 304, 66–74 (2004).

3. Garcia Martin, H. et al. Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities. Nat. Biotechnol. 24, 1263–1269 (2006).

4. Hallam, S.J. et al. Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum . Proc. Natl. Acad. Sci. USA 103, 18296–18301 (2006).

5. Delcher, A.L., Harmon, D., Kasif, S., White, O. & Salzberg, S.L. Improved microbial gene identification with GLIMMER. Nucleic Acids Res. 27, 4636–4641 (1999).

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