SMiLE-seq identifies binding motifs of single and dimeric transcription factors-Reference-Cited by-同舟云学术

SMiLE-seq identifies binding motifs of single and dimeric transcription factors

Published:2017-01-16 Issue:3 Volume:14 Page:316-322
ISSN:1548-7091
Container-title:Nature Methods
language:en
Short-container-title:Nat Methods

Author:

Isakova Alina,Groux Romain,Imbeault Michael,Rainer Pernille,Alpern Daniel^ORCID,Dainese Riccardo,Ambrosini Giovanna,Trono Didier,Bucher Philipp,Deplancke Bart

Publisher

Springer Science and Business Media LLC

Subject

Cell Biology,Molecular Biology,Biochemistry,Biotechnology

Link

http://www.nature.com/articles/nmeth.4143.pdf

Reference49 articles.

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2. Mathelier, A. et al. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic Acids Res. 42, D142–D147 (2014).

3. Newburger, D.E. & Bulyk, M.L. UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic Acids Res. 37, D77–D82 (2009).

4. Kulakovskiy, I.V. et al. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res. 44 D1, D116–D125 (2016).

5. Fulton, D.L. et al. TFCat: the curated catalog of mouse and human transcription factors. Genome Biol. 10, R29 (2009).

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