Deciphering bacterial epigenomes using modern sequencing technologies
Author:
Publisher
Springer Science and Business Media LLC
Subject
Genetics (clinical),Genetics,Molecular Biology
Link
http://www.nature.com/articles/s41576-018-0081-3.pdf
Reference165 articles.
1. Boyer, H. Genetic control of restriction and modification in Escherichi coli. J. Bacteriol. 88, 1652–1660 (1964).
2. Casadesús, J. & Low, D. Epigenetic gene regulation in the bacterial world. Microbiol. Mol. Biol. Rev. 70, 830–856 (2006). This review discusses how bacterial DNA methylation acts as a regulatory signal in various bacteria.
3. Fang, G. et al. Genome-wide mapping of methylated adenine residues in pathogenic Escherichia coli using single-molecule real-time sequencing. Nat. Biotechnol. 30, 1232–1239 (2012). This paper describes the first application of SMRT sequencing to detect bacterial 6mA events at single-base resolution and genome-wide scale.
4. Wion, D. & Casadesús, J. N6-methyl-adenine: an epigenetic signal for DNA-protein interactions. Nat. Rev. Microbiol. 4, 183–192 (2006). This review discusses the use of 6mA as a regulatory signal in various bacteria.
5. Løbner-Olesen, A., Marinus, M. G. & Hansen, F. G. Role of SeqA and Dam in Escherichia coli gene expression: a global/microarray analysis. Proc. Natl Acad. Sci. USA 100, 4672–4677 (2003).
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