Chromosome-level genome assembly of the Asian aspen Populus davidiana Dode

Author:

Bae Eun-Kyung,Kang Min-Jeong,Lee Seung-Jae,Park Eung-JunORCID,Kim Ki-Tae

Abstract

AbstractThe genome ofPopulus davidiana, a keystone aspen species, has been sequenced to improve our understanding of the evolutionary and functional genomics of thePopulusgenus. The Hi-C scaffolding genome assembly resulted in a 408.1 Mb genome with 19 pseudochromosomes. The BUSCO assessment revealed that 98.3% of the genome matched the embryophytes dataset. A total of 31,862 protein-coding sequences were predicted, of which 31,619 were functionally annotated. The assembled genome was composed of 44.9% transposable elements. These findings provide new knowledge about the characteristics of theP. davidianagenome and will facilitate comparative genomics and evolutionary research on the genusPopulus.

Publisher

Springer Science and Business Media LLC

Subject

Library and Information Sciences,Statistics, Probability and Uncertainty,Computer Science Applications,Education,Information Systems,Statistics and Probability

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