Author:
Patra Ajit Kumar,Ho Phuong-Thao,Jun Siyeong,Lee Seung Jae,Kim Yuseob,Won Yong-Jin
Abstract
AbstractBatillaridae is a common gastropod family that occurs abundantly in the shallow coastal zone of the intertidal mudflats of the northwest Pacific Ocean, Australasia, and North America. In this family, Batillaria attramentaria is known for its biological invasion and colonization in estuarine and intertidal zones. It can endure and adapt the harsh intertidal conditions such as frequent temperature alteration, salinity, and air exposure. Therefore, we sequenced and assembled this Korean batillariid genome to get insight into its intertidal adaptive features. Approximately 53 Gb of DNA sequences were generated, and 863 scaffolds were assembled into a draft genome of 0.715 Gb with 97.1% BUSCO completeness value. A total of 40,596 genes were predicted. We estimated that B. attramentaria and Conus consors diverged about 230 million years ago (MYA) based on the phylogenetic analysis of closely related gastropod species. This genome study sets the footstep for genomics studies among native and introduced Batillaria populations and the Batillaridae family members.
Funder
National Research Foundation of Korea
Ministry of Education
Korea Institute of Ocean Science and Technology
Ewha Womans University
Publisher
Springer Science and Business Media LLC
Subject
Library and Information Sciences,Statistics, Probability and Uncertainty,Computer Science Applications,Education,Information Systems,Statistics and Probability
Reference65 articles.
1. Ho, P. T., Kwan, Y. S., Kim, B. & Won, Y. J. Postglacial range shift and demographic expansion of the marine intertidal snail Batillaria attramentaria. Ecol. Evol. 5, 419–435 (2015).
2. Kojima, S., Hayashi, I., Kim, D., Iijima, A. & Furota, T. Phylogeography of an intertidal direct-developing gastropod Batillaria cumingi around the Japanese Islands. Mar. Ecol. Prog. Ser. 276, 161–172 (2004).
3. Ozawa, T., Köhler, F., Reid, D. G. & Glaubrecht, M. Tethyan relicts on continental coastlines of the northwestern Pacific Ocean and Australasia: molecular phylogeny and fossil record of batillariid gastropods (Caenogastropoda, Cerithioidea). Zool. Scr. 38, 503–525 (2009).
4. Prozorova1, L. A., Volvenko, I. E. & Noseworthy, R. Distribution and ecological morphs of northwestern Pacific gastropod Batillaria attramentaria (GB Sowerby II, 1855)(Cenogastropoda: Batillariidae). Marine Ecosystems under the Global Change in the Northwestern Pacific, 139 (2012).
5. Adachi, N. & Wada, K. Distribution in relation to life history in the direct–developing gastropod Batillaria cumingi (Batillariidae) on two shores of contrasting substrata. J. Molluscan Stud. 65, 275–288 (1999).
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