Direct measurement of DNA affinity landscapes on a high-throughput sequencing instrument-Reference-Cited by-同舟云学术

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Direct measurement of DNA affinity landscapes on a high-throughput sequencing instrument

Published:2011-06-26 Issue:7 Volume:29 Page:659-664
ISSN:1087-0156
Container-title:Nature Biotechnology
language:en
Short-container-title:Nat Biotechnol

Author:

Nutiu Razvan,Friedman Robin C,Luo Shujun,Khrebtukova Irina,Silva David,Li Robin,Zhang Lu,Schroth Gary P,Burge Christopher B

Publisher

Springer Science and Business Media LLC

Subject

Biomedical Engineering,Molecular Medicine,Applied Microbiology and Biotechnology,Bioengineering,Biotechnology

Link

http://www.nature.com/articles/nbt.1882.pdf

Reference32 articles.

1. Klug, S.J. & Famulok, M. All you wanted to know about SELEX. Mol. Biol. Rep. 20, 97–107 (1994).

2. Ren, B. et al. Genome-wide location and function of DNA binding proteins. Science 290, 2306–2309 (2000).

3. Mukherjee, S. et al. Rapid analysis of the DNA-binding specificities of transcription factors with DNA microarrays. Nat. Genet. 36, 1331–1339 (2004).

4. Johnson, D.S., Mortazavi, A., Myers, R.M. & Wold, B. Genome-wide mapping of in vivo protein-DNA interactions. Science 316, 1497–1502 (2007).

5. Zhao, Y., Granas, D. & Stormo, G.D. Inferring binding energies from selected binding sites. PLOS Comput. Biol. 5, e1000590 (2009).

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