The state of play in higher eukaryote gene annotation
Author:
Publisher
Springer Science and Business Media LLC
Subject
Genetics(clinical),Genetics,Molecular Biology
Link
http://www.nature.com/articles/nrg.2016.119.pdf
Reference135 articles.
1. Gerstein, M. B. et al. What is a gene, post-ENCODE? History and updated definition. Genome Res. 17, 669–681 (2007). This influential article attempts to rationalize a modern description of the gene in the context of transcriptional complexity.
2. Harrow, J. et al. GENCODE: The reference human genome annotation for The ENCODE Project. Genome Res. 22, 1760–1774 (2012). This provides a detailed description of the GENCODE annotation pipeline.
3. Kim, V. N., Han, J. & Siomi, M. C. Biogenesis of small RNAs in animals. Nat. Rev. Mol. Cell Biol. 10, 126–139 (2009).
4. Andersson, L. et al. Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project. Genome Biol. 16, 57 (2015).
5. O'Leary, N. A. et al. Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation. Nucleic Acids Res. 44, D733–D745 (2016). This is an excellent starting point for exploring the NCBI annotation resources.
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