Analysis and design of RNA sequencing experiments for identifying isoform regulation-Reference-Cited by-同舟云学术

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Analysis and design of RNA sequencing experiments for identifying isoform regulation

Published:2010-11-07 Issue:12 Volume:7 Page:1009-1015
ISSN:1548-7091
Container-title:Nature Methods
language:en
Short-container-title:Nat Methods

Author:

Katz Yarden,Wang Eric T,Airoldi Edoardo M,Burge Christopher B

Publisher

Springer Science and Business Media LLC

Subject

Cell Biology,Molecular Biology,Biochemistry,Biotechnology

Link

http://www.nature.com/articles/nmeth.1528.pdf

Reference38 articles.

1. Matlin, A.J., Clark, F. & Smith, C.W.J. Understanding alternative splicing: towards a cellular code. Nat. Rev. Mol. Cell Biol. 6, 386–398 (2005).

2. Christofk, H.R. et al. The M2 splice isoform of pyruvate kinase is important for cancer metabolism and tumour growth. Nature 452, 230–233 (2008).

3. Rowen, L. et al. Analysis of the human neurexin genes: alternative splicing and the generation of protein diversity. Genomics 79, 587–597 (2002).

4. Wang, E.T. et al. Alternative isoform regulation in human tissue transcriptomes. Nature 456, 470–476 (2008).

5. Mortazavi, A., Williams, B.A.A., McCue, K., Schaeffer, L. & Wold, B. Mapping and quantifying mammalian transcriptomes by RNA-seq. Nat. Methods 5, 621–628 (2008).

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