In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data

Author:

Edwards Jeremy S.,Ibarra Rafael U.,Palsson Bernhard O.

Publisher

Springer Science and Business Media LLC

Subject

Biomedical Engineering,Molecular Medicine,Applied Microbiology and Biotechnology,Bioengineering,Biotechnology

Reference51 articles.

1. TIGR Microbial database: a listing of published microbial genomes and chromosomes and those in progress. (The Institute for Genomic Research, Rockville, MD, 2000). http://www.tigr.org/tdb/mdb/mdbcomplete.html

2. Karp, P.D. et al. The EcoCyc and MetaCyc databases. Nucleic Acids Res. 28, 56–59 (2000).

3. Selkov, E. Jr.,, Grechkin, Y., Mikhailova, N. & Selkov, E. MPW: the Metabolic Pathways Database. Nucleic Acids Res. 26, 43–45 (1998).

4. Ogata, H. et al. KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res. 27, 29–34 (1999).

5. Karp. P.D., Ouzounis, C. & Paley, S. HinCyc: a knowledge base of the complete genome and metabolic pathways of H. influenzae. Proceedings of the ISMB-96 Conference 4, 116–124 (1996).

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