Identification of active transcriptional regulatory elements from GRO-seq data-Reference-Cited by-同舟云学术

Identification of active transcriptional regulatory elements from GRO-seq data

Published:2015-03-23 Issue:5 Volume:12 Page:433-438
ISSN:1548-7091
Container-title:Nature Methods
language:en
Short-container-title:Nat Methods

Author:

Danko Charles G,Hyland Stephanie L,Core Leighton J,Martins Andre L,Waters Colin T^ORCID,Lee Hyung Won,Cheung Vivian G,Kraus W Lee,Lis John T,Siepel Adam

Publisher

Springer Science and Business Media LLC

Subject

Cell Biology,Molecular Biology,Biochemistry,Biotechnology

Link

http://www.nature.com/articles/nmeth.3329.pdf

Reference44 articles.

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3. Giresi, P.G. & Lieb, J.D. Isolation of active regulatory elements from eukaryotic chromatin using FAIRE (Formaldehyde Assisted Isolation of Regulatory Elements). Methods 48, 233–239 (2009).

4. Buenrostro, J.D., Giresi, P.G., Zaba, L.C., Chang, H.Y. & Greenleaf, W.J. Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position. Nat. Methods 10, 1213–1218 (2013).

5. Cusanovich, D.A., Pavlovic, B., Pritchard, J.K. & Gilad, Y. The functional consequences of variation in transcription factor binding. PLoS Genet. 10, e1004226 (2014).

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