Reporter pathway analysis from transcriptome data: Metabolite-centric versus Reaction-centric approach
Author:
Publisher
Springer Science and Business Media LLC
Subject
Multidisciplinary
Link
http://www.nature.com/articles/srep14563.pdf
Reference58 articles.
1. Curtis, R. K., Oresic, M. & Vidal-Puig, A. Pathways to the analysis of microarray data. Trends Biotechnol. 23, 429–435 (2005).
2. Grosu, P., Townsend, J. P., Hartl, D. L. & Cavalieri, D. Pathway Processor: a tool for integrating whole-genome expression results into metabolic networks. Genome Res. 12, 1121–1126 (2002).
3. Ertel, A., Verghese, A., Byers, S. W., Ochs, M. & Tozeren, A. Pathway-specific differences between tumor cell lines and normal and tumor tissue cells. Mol. Cancer 5, 55, 10.1186/1476-4598-5-55 (2006).
4. Tarca, A. L., Bhatti, G. & Romero, R. A comparison of gene set analysis methods in terms of sensitivity, prioritization and specificity. PloS one 8, e79217, 10.1371/journal.pone.0079217 (2013).
5. Xie, C. et al. KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases. Nucleic acids Res. 39, W316–W322 (2011).
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