The Medical Genome Reference Bank contains whole genome and phenotype data of 2570 healthy elderly

Author:

Pinese Mark,Lacaze PaulORCID,Rath Emma M.ORCID,Stone Andrew,Brion Marie-Jo,Ameur AdamORCID,Nagpal Sini,Puttick Clare,Husson Shane,Degrave Dmitry,Cristina Tina Navin,Kahl Vivian F. S.,Statham Aaron L.,Woods Robyn L.,McNeil John J.ORCID,Riaz Moeen,Barr Margo,Nelson Mark R.,Reid Christopher M.,Murray Anne M.,Shah Raj C.,Wolfe Rory,Atkins Joshua R.ORCID,Fitzsimmons Chantel,Cairns Heath M.,Green Melissa J.,Carr Vaughan J.,Cowley Mark J.,Pickett Hilda A.,James Paul A.ORCID,Powell Joseph E.,Kaplan Warren,Gibson GregORCID,Gyllensten Ulf,Cairns Murray J.ORCID,McNamara Martin,Dinger Marcel E.ORCID,Thomas David M.ORCID

Abstract

AbstractPopulation health research is increasingly focused on the genetic determinants of healthy ageing, but there is no public resource of whole genome sequences and phenotype data from healthy elderly individuals. Here we describe the first release of the Medical Genome Reference Bank (MGRB), comprising whole genome sequence and phenotype of 2570 elderly Australians depleted for cancer, cardiovascular disease, and dementia. We analyse the MGRB for single-nucleotide, indel and structural variation in the nuclear and mitochondrial genomes. MGRB individuals have fewer disease-associated common and rare germline variants, relative to both cancer cases and the gnomAD and UK Biobank cohorts, consistent with risk depletion. Age-related somatic changes are correlated with grip strength in men, suggesting blood-derived whole genomes may also provide a biologic measure of age-related functional deterioration. The MGRB provides a broadly applicable reference cohort for clinical genetics and genomic association studies, and for understanding the genetics of healthy ageing.

Funder

Department of Health | National Health and Medical Research Council

Sylvia and Charles Viertel Charitable Foundation

NSW Ministry of Health

Ramsay Health Care Schizophrenia Research Institute

Science for Life Laboratory

Knut och Alice Wallenbergs Stiftelse

Kinghorn Foundation

NSW Office for Health and Medical Research Genomics Collaborative Grants scheme

Publisher

Springer Science and Business Media LLC

Subject

General Physics and Astronomy,General Biochemistry, Genetics and Molecular Biology,General Chemistry

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