Clustering huge protein sequence sets in linear time
Author:
Publisher
Springer Science and Business Media LLC
Subject
General Physics and Astronomy,General Biochemistry, Genetics and Molecular Biology,General Chemistry
Link
http://www.nature.com/articles/s41467-018-04964-5.pdf
Reference33 articles.
1. Rappe, M. S. & Giovannoni, S. J. The uncultured microbial majority. Ann. Rev. Microbiol. 57, 369–394 (2003).
2. Wilke, A. et al. The MG-RAST metagenomics database and portal in 2015. Nucleic Acids Res. 44, D590–D594 (2016).
3. Markowitz, V. M. et al. IMG/M 4 version of the integrated metagenome comparative analysis system. Nucleic Acids Res. 42, D568–D573 (2014).
4. Scholz, M. B., Lo, C.-C. & Chain, P. S. Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis. Curr. Opin. Biotechnol. 23, 9–15 (2012).
5. Desai, N., Antonopoulos, D., Gilbert, J. A., Glass, E. M. & Meyer, F. From genomics to metagenomics. Curr. Opin. Biotechnol. 23 72–76 (2012).
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