Single cell atlas for 11 non-model mammals, reptiles and birds-Reference-Cited by-同舟云学术

Single cell atlas for 11 non-model mammals, reptiles and birds

Published:2021-12 Issue:1 Volume:12 Page:
ISSN:2041-1723
Container-title:Nature Communications
language:en
Short-container-title:Nat Commun

Author:

Chen Dongsheng,Sun Jian,Zhu Jiacheng,Ding Xiangning,Lan Tianming,Wang Xiran,Wu Weiying,Ou Zhihua,Zhu Linnan,Ding Peiwen^ORCID,Wang Haoyu,Luo Lihua,Xiang Rong,Wang Xiaoling,Qiu Jiaying,Wang Shiyou^ORCID,Li Haimeng,Chai Chaochao,Liang Langchao,An Fuyu,Zhang Le,Han Lei,Zhu Yixin,Wang Feiyue,Yuan Yuting,Wu Wendi,Sun Chengcheng,Lu Haorong,Wu Jihong,Sun Xinghuai,Zhang Shenghai,Sahu Sunil Kumar^ORCID,Liu Ping,Xia Jun,Zhang Lijing,Chen Haixia,Fang Dongming,Zeng Yuying,Wu Yiquan,Cui Zehua,He Qian,Jiang Sanjie,Ma Xiaoyan,Feng Weimin,Xu Yan,Li Fang,Liu Zhongmin,Chen Lei,Chen Fang,Jin Xin^ORCID,Qiu Wei,Wang Tianjiao,Li Yang,Xing Xiumei,Yang Huanming,Xu Yanchun,Hua Yan,Liu Yahong,Liu Huan^ORCID,Xu Xun^ORCID

Abstract

AbstractThe availability of viral entry factors is a prerequisite for the cross-species transmission of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Large-scale single-cell screening of animal cells could reveal the expression patterns of viral entry genes in different hosts. However, such exploration for SARS-CoV-2 remains limited. Here, we perform single-nucleus RNA sequencing for 11 non-model species, including pets (cat, dog, hamster, and lizard), livestock (goat and rabbit), poultry (duck and pigeon), and wildlife (pangolin, tiger, and deer), and investigated the co-expression of ACE2 and TMPRSS2. Furthermore, cross-species analysis of the lung cell atlas of the studied mammals, reptiles, and birds reveals core developmental programs, critical connectomes, and conserved regulatory circuits among these evolutionarily distant species. Overall, our work provides a compendium of gene expression profiles for non-model animals, which could be employed to identify potential SARS-CoV-2 target cells and putative zoonotic reservoirs.

Publisher

Springer Science and Business Media LLC

Subject

General Physics and Astronomy,General Biochemistry, Genetics and Molecular Biology,General Chemistry

Link

https://www.nature.com/articles/s41467-021-27162-2.pdf

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