Multi-omics prediction of immune-related adverse events during checkpoint immunotherapy

Author:

Jing Ying,Liu Jin,Ye YouqiongORCID,Pan Lei,Deng Hui,Wang Yushu,Yang Yang,Diao LixiaORCID,Lin Steven H.ORCID,Mills Gordon B.ORCID,Zhuang GuangleiORCID,Xue XinyingORCID,Han LengORCID

Abstract

AbstractImmune-related adverse events (irAEs), caused by anti-PD-1/PD-L1 antibodies, can lead to fulminant and even fatal consequences and thus require early detection and aggressive management. However, a comprehensive approach to identify biomarkers of irAE is lacking. Here, we utilize a strategy that combines pharmacovigilance data and omics data, and evaluate associations between multi-omics factors and irAE reporting odds ratio across different cancer types. We identify a bivariate regression model of LCP1 and ADPGK that can accurately predict irAE. We further validate LCP1 and ADPGK as biomarkers in an independent patient-level cohort. Our approach provides a method for identifying potential biomarkers of irAE in cancer immunotherapy using both pharmacovigilance data and multi-omics data.

Funder

Cancer Prevention and Research Institute of Texas

Publisher

Springer Science and Business Media LLC

Subject

General Physics and Astronomy,General Biochemistry, Genetics and Molecular Biology,General Chemistry

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