Maximal viral information recovery from sequence data using VirMAP
Author:
Publisher
Springer Science and Business Media LLC
Subject
General Physics and Astronomy,General Biochemistry, Genetics and Molecular Biology,General Chemistry
Link
http://www.nature.com/articles/s41467-018-05658-8.pdf
Reference22 articles.
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2. Lin, J. et al. Vipie: web pipeline for parallel characterization of viral populations from multiple NGS samples. BMC Genom. 18, 378 (2017).
3. Rampelli, S. et al. ViromeScan: a new tool for metagenomic viral community profiling. BMC Genom. 17, 165 (2016).
4. Segata, N. et al. Metagenomic microbial community profiling using unique clade-specific marker genes. Nat. Methods 9, 811–814 (2012).
5. Tithi, S. S., Aylward, F. O., Jensen, R. V. & Zhang, L. FastViromeExplorer: a pipeline for virus and phage identification and abundance profiling in metagenomics data. PeerJ 6, e4227 (2018).
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