Network Walking charts transcriptional dynamics of nitrogen signaling by integrating validated and predicted genome-wide interactions-Reference-Cited by-同舟云学术

Network Walking charts transcriptional dynamics of nitrogen signaling by integrating validated and predicted genome-wide interactions

Published:2019-04-05 Issue:1 Volume:10 Page:
ISSN:2041-1723
Container-title:Nature Communications
language:en
Short-container-title:Nat Commun

Author:

Brooks Matthew D.,Cirrone Jacopo,Pasquino Angelo V.^ORCID,Alvarez Jose M.,Swift Joseph,Mittal Shipra,Juang Che-Lun^ORCID,Varala Kranthi,Gutiérrez Rodrigo A.^ORCID,Krouk Gabriel^ORCID,Shasha Dennis,Coruzzi Gloria M.^ORCID

Publisher

Springer Science and Business Media LLC

Subject

General Physics and Astronomy,General Biochemistry, Genetics and Molecular Biology,General Chemistry

Link

http://www.nature.com/articles/s41467-019-09522-1.pdf

Reference71 articles.

1. Marbach, D. et al. Wisdom of crowds for robust gene network inference. Nat. Methods 9, 796 (2012).

2. Li, Y., Pearl, S. A. & Jackson, S. A. Gene networks in plant biology: approaches in reconstruction and analysis. Trends Plant. Sci. 20, 664–675 (2015).

3. Basso, K. et al. Reverse engineering of regulatory networks in human B cells. Nat. Genet. 37, 382 (2005).

4. Arrieta‐Ortiz, M. L. et al. An experimentally supported model of the Bacillus subtilis global transcriptional regulatory network. Mol. Syst. Biol. 11, 839 (2015).

5. O’Malley, R. C. et al. Cistrome and epicistrome features shape the regulatory DNA landscape. Cell 166, 1598 (2016).

Cited by 103 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Single-nucleus transcriptomics resolves differentiation dynamics between shoot stem cells and primary stem;2024-08-08

2. Nitrate transporters and mechanisms of nitrate signal transduction in Arabidopsis and rice;Physiologia Plantarum;2024-07

3. Dynamic changes in mRNA nucleocytoplasmic localization in the nitrate response of Arabidopsis roots;Plant, Cell & Environment;2024-07

4. Optimizing data integration improves gene regulatory network inference in Arabidopsis thaliana;Bioinformatics;2024-06-24

5. Recent advances in exploring transcriptional regulatory landscape of crops;Frontiers in Plant Science;2024-06-05