Context-aware deep learning enables high-efficacy localization of high concentration microbubbles for super-resolution ultrasound localization microscopy

Author:

Shin YiRang,Lowerison Matthew R.,Wang YikeORCID,Chen Xi,You Qi,Dong ZhijieORCID,Anastasio Mark A.ORCID,Song PengfeiORCID

Abstract

AbstractUltrasound localization microscopy (ULM) enables deep tissue microvascular imaging by localizing and tracking intravenously injected microbubbles circulating in the bloodstream. However, conventional localization techniques require spatially isolated microbubbles, resulting in prolonged imaging time to obtain detailed microvascular maps. Here, we introduce LOcalization with Context Awareness (LOCA)-ULM, a deep learning-based microbubble simulation and localization pipeline designed to enhance localization performance in high microbubble concentrations. In silico, LOCA-ULM enhanced microbubble detection accuracy to 97.8% and reduced the missing rate to 23.8%, outperforming conventional and deep learning-based localization methods up to 17.4% in accuracy and 37.6% in missing rate reduction. In in vivo rat brain imaging, LOCA-ULM revealed dense cerebrovascular networks and spatially adjacent microvessels undetected by conventional ULM. We further demonstrate the superior localization performance of LOCA-ULM in functional ULM (fULM) where LOCA-ULM significantly increased the functional imaging sensitivity of fULM to hemodynamic responses invoked by whisker stimulations in the rat brain.

Funder

U.S. Department of Health & Human Services | NIH | National Institute on Aging

U.S. Department of Health & Human Services | NIH | National Institute of Biomedical Imaging and Bioengineering

U.S. Department of Health & Human Services | NIH | National Institute of Neurological Disorders and Stroke

National Science Foundation

UofI | UIUC | Beckman Institute for Advanced Science and Technology, University of Illinois, Urbana-Champaign

Supported by a Beckman Institute Postdoctoral Fellowship.

Publisher

Springer Science and Business Media LLC

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