Developing a COVID-19 mortality risk prediction model when individual-level data are not available

Author:

Barda NoamORCID,Riesel DanORCID,Akriv Amichay,Levy Joseph,Finkel Uriah,Yona Gal,Greenfeld Daniel,Sheiba Shimon,Somer Jonathan,Bachmat EitanORCID,Rothblum Guy N.,Shalit Uri,Netzer Doron,Balicer Ran,Dagan NoaORCID

Abstract

AbstractAt the COVID-19 pandemic onset, when individual-level data of COVID-19 patients were not yet available, there was already a need for risk predictors to support prevention and treatment decisions. Here, we report a hybrid strategy to create such a predictor, combining the development of a baseline severe respiratory infection risk predictor and a post-processing method to calibrate the predictions to reported COVID-19 case-fatality rates. With the accumulation of a COVID-19 patient cohort, this predictor is validated to have good discrimination (area under the receiver-operating characteristics curve of 0.943) and calibration (markedly improved compared to that of the baseline predictor). At a 5% risk threshold, 15% of patients are marked as high-risk, achieving a sensitivity of 88%. We thus demonstrate that even at the onset of a pandemic, shrouded in epidemiologic fog of war, it is possible to provide a useful risk predictor, now widely used in a large healthcare organization.

Publisher

Springer Science and Business Media LLC

Subject

General Physics and Astronomy,General Biochemistry, Genetics and Molecular Biology,General Chemistry

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