Comprehensive characterization of IFNγ signaling in acute myeloid leukemia reveals prognostic and therapeutic strategies

Author:

Wang Bofei,Reville Patrick K.ORCID,Yassouf Mhd YousufORCID,Jelloul Fatima Z.ORCID,Ly ChristopherORCID,Desai Poonam N.,Wang Zhe,Borges Pamella,Veletic Ivo,Dasdemir EnesORCID,Burks Jared K.ORCID,Tang GuilinORCID,Guo Shengnan,Garza Araceli Isabella,Nasnas CedricORCID,Vaughn Nicole R.,Baran NataliaORCID,Deng Qing,Matthews Jairo,Gunaratne Preethi H.,Antunes Dinler A.,Ekmekcioglu SuhendanORCID,Sasaki KojiORCID,Garcia Miriam B.,Cuglievan Branko,Hao DapengORCID,Daver NavalORCID,Green Michael R.ORCID,Konopleva MarinaORCID,Futreal AndrewORCID,Post Sean M.,Abbas Hussein A.ORCID

Abstract

AbstractInterferon gamma (IFNγ) is a critical cytokine known for its diverse roles in immune regulation, inflammation, and tumor surveillance. However, while IFNγ levels were elevated in sera of most newly diagnosed acute myeloid leukemia (AML) patients, its complex interplay in AML remains insufficiently understood. We aim to characterize these complex interactions through comprehensive bulk and single-cell approaches in bone marrow of newly diagnosed AML patients. We identify monocytic AML as having a unique microenvironment characterized by IFNγ producing T and NK cells, high IFNγ signaling, and immunosuppressive features. IFNγ signaling score strongly correlates with venetoclax resistance in primary AML patient cells. Additionally, IFNγ treatment of primary AML patient cells increased venetoclax resistance. Lastly, a parsimonious 47-gene IFNγ score demonstrates robust prognostic value. In summary, our findings suggest that inhibiting IFNγ is a potential treatment strategy to overcoming venetoclax resistance and immune evasion in AML patients.

Publisher

Springer Science and Business Media LLC

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